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INDEXED
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AuxiliarySet
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IGVFDS2370ZRIR
IGVFDS2370ZRIR
released
Json view
File Set Type
quantification DNA barcode sequencing
Summary
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Aliases
jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day12_reads
Publications
Multiplex profiling of developmental cis-regulatory elements with quantitative single-cell expression reporters
Sequencing Results (Illumina)
3 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2732UAKI
fastq
reads
R3
1
Illumina NextSeq 500
H5VLMBGXM
1
286 MB
Jay Shendure, UW
validated
IGVFFI6217NSYJ
fastq
reads
R2
1
Illumina NextSeq 500
H5VLMBGXM
1
239 MB
Jay Shendure, UW
validated
IGVFFI9023RNEB
fastq
reads
R1
1
Illumina NextSeq 500
H5VLMBGXM
1
265 MB
Jay Shendure, UW
validated
Samples
Donors
Related Measurement Sets
File Sets Using This Auxiliary Set as an Input
Attribution
Award
HG011966
Principal Investigator(s)
Jay Shendure
,
Nadav Ahituv
,
Martin Kircher
Contact P.I.
Jay Shendure
Lab
Jay Shendure, UW