IGVFDS2071POUF

released
{
    "@context": "/terms/",
    "@id": "/auxiliary-sets/IGVFDS2071POUF/",
    "@type": [
        "AuxiliarySet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS2071POUF",
    "aliases": [
        "ansuman-satpathy:multiseq_igvf16_10x1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released multiplexed sample [IGVFSM3549KFGD](/multiplexed-samples/IGVFSM3549KFGD/) has in progress subobject tabular file [IGVFFI2383CFVI](/tabular-files/IGVFFI2383CFVI/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/multiplexed-samples/IGVFSM3549KFGD/"
            },
            {
                "category": "mismatched status",
                "detail": "Released auxiliary set [IGVFDS2071POUF](/auxiliary-sets/IGVFDS2071POUF/) has in progress subobject tabular file [IGVFFI2383CFVI](/tabular-files/IGVFFI2383CFVI/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/auxiliary-sets/IGVFDS2071POUF/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG012076/",
        "component": "mapping",
        "contact_pi": {
            "@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
            "title": "Ansuman Satpathy"
        },
        "title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
    },
    "barcode_map": "/tabular-files/IGVFFI2383CFVI/",
    "control_for": [],
    "controlled_access": true,
    "creation_timestamp": "2025-02-03T21:18:05.935103+00:00",
    "data_use_limitation_summaries": [
        "GRU"
    ],
    "donors": [
        {
            "@id": "/human-donors/IGVFDO7813GMND/",
            "accession": "IGVFDO7813GMND",
            "aliases": [
                "ansuman-satpathy:donor_of_A001",
                "igvf:donor_A001"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2650AGWB/",
            "accession": "IGVFDO2650AGWB",
            "aliases": [
                "ansuman-satpathy:donor_of_WA14",
                "igvf:donor_WA14"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO1364EAZP/",
            "accession": "IGVFDO1364EAZP",
            "aliases": [
                "ansuman-satpathy:donor_of_PENN086i-278-1",
                "igvf:donor_PENN086i-278-1"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO6441FSJH/",
            "accession": "IGVFDO6441FSJH",
            "aliases": [
                "ansuman-satpathy:donor_of_A003",
                "igvf:donor_A003"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO1964RNHE/",
            "accession": "IGVFDO1964RNHE",
            "aliases": [
                "ansuman-satpathy:donor_of_C003",
                "igvf:donor_C003"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO1221XJAX/",
            "accession": "IGVFDO1221XJAX",
            "aliases": [
                "ansuman-satpathy:donor_of_WA13",
                "igvf:donor_WA13"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2492CCQG/",
            "accession": "IGVFDO2492CCQG",
            "aliases": [
                "ansuman-satpathy:donor_of_B004",
                "igvf:donor_B004"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO4001VEAC/",
            "accession": "IGVFDO4001VEAC",
            "aliases": [
                "ansuman-satpathy:donor_of_XM001",
                "igvf:donor_XM001"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO7650ICPB/",
            "accession": "IGVFDO7650ICPB",
            "aliases": [
                "ansuman-satpathy:donor_of_B001",
                "igvf:donor_B001"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO4532PFAJ/",
            "accession": "IGVFDO4532PFAJ",
            "aliases": [
                "ansuman-satpathy:donor_of_A010",
                "igvf:donor_A010"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO0183MFIP/",
            "accession": "IGVFDO0183MFIP",
            "aliases": [
                "ansuman-satpathy:donor_of_KOLF2.2J",
                "igvf:donor_KOLF2.2J"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO4134ZWBU/",
            "accession": "IGVFDO4134ZWBU",
            "aliases": [
                "ansuman-satpathy:donor_of_B005",
                "igvf:donor_B005"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO5614PTYQ/",
            "accession": "IGVFDO5614PTYQ",
            "aliases": [
                "ansuman-satpathy:donor_of_A004",
                "igvf:donor_A004"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO9716HDYX/",
            "accession": "IGVFDO9716HDYX",
            "aliases": [
                "ansuman-satpathy:donor_of_A002",
                "igvf:donor_A002"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO6638HIAD/",
            "accession": "IGVFDO6638HIAD",
            "aliases": [
                "igvf:donor_of_H1"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8893DMFF/",
            "accession": "IGVFDO8893DMFF",
            "aliases": [
                "ansuman-satpathy:donor_of_B006",
                "igvf:donor_B006"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO5729MXSO/",
            "accession": "IGVFDO5729MXSO",
            "aliases": [
                "ansuman-satpathy:donor_of_B008",
                "igvf:donor_B008"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO4876ENMD/",
            "accession": "IGVFDO4876ENMD",
            "aliases": [
                "ansuman-satpathy:donor_of_C007",
                "igvf:donor_C007"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO4452ZQSF/",
            "accession": "IGVFDO4452ZQSF",
            "aliases": [
                "ansuman-satpathy:donor_of_B010",
                "igvf:donor_B010"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO6162MIWK/",
            "accession": "IGVFDO6162MIWK",
            "aliases": [
                "ansuman-satpathy:donor_of_WA26",
                "igvf:donor_WA26"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO7470LCGC/",
            "accession": "IGVFDO7470LCGC",
            "aliases": [
                "ansuman-satpathy:donor_of_WA25",
                "igvf:donor_WA25"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO7725MEWB/",
            "accession": "IGVFDO7725MEWB",
            "aliases": [
                "ansuman-satpathy:donor_of_GM00731",
                "igvf:donor_GM00731"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO0720ONIQ/",
            "accession": "IGVFDO0720ONIQ",
            "aliases": [
                "ansuman-satpathy:donor_of_C004",
                "igvf:donor_C004"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8129UUAA/",
            "accession": "IGVFDO8129UUAA",
            "aliases": [
                "ansuman-satpathy:donor_of_C008",
                "igvf:donor_C008"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8315PGTI/",
            "accession": "IGVFDO8315PGTI",
            "aliases": [
                "igvf:donor_HUES8"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8129FWUV/",
            "accession": "IGVFDO8129FWUV",
            "aliases": [
                "ansuman-satpathy:donor_of_B011",
                "igvf:donor_B011"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO7140TLQJ/",
            "accession": "IGVFDO7140TLQJ",
            "aliases": [
                "ansuman-satpathy:donor_of_Hues9",
                "igvf:donor_Hues9"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2817PSCX/",
            "accession": "IGVFDO2817PSCX",
            "aliases": [
                "ansuman-satpathy:donor_of_A009",
                "igvf:donor_A009"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO7670TOWV/",
            "accession": "IGVFDO7670TOWV",
            "aliases": [
                "ansuman-satpathy:donor_of_B012",
                "igvf:donor_B012"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO9617JBWJ/",
            "accession": "IGVFDO9617JBWJ",
            "aliases": [
                "ansuman-satpathy:donor_of_B002",
                "igvf:donor_B002"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO0324ZSAY/",
            "accession": "IGVFDO0324ZSAY",
            "aliases": [
                "ansuman-satpathy:donor_of_PENN020i-588-6",
                "igvf:donor_PENN0201-588-6"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2620HPCX/",
            "accession": "IGVFDO2620HPCX",
            "aliases": [
                "ansuman-satpathy:donor_of_B003",
                "igvf:donor_B003"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO0657EMJH/",
            "accession": "IGVFDO0657EMJH",
            "aliases": [
                "ansuman-satpathy:donor_of_GM01652",
                "igvf:donor_GM01652"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2718IDDQ/",
            "accession": "IGVFDO2718IDDQ",
            "aliases": [
                "igvf:donor_of_H9"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO3755LIBB/",
            "accession": "IGVFDO3755LIBB",
            "aliases": [
                "ansuman-satpathy:donor_of_A006",
                "igvf:donor_A006"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2750DZPB/",
            "accession": "IGVFDO2750DZPB",
            "aliases": [
                "ansuman-satpathy:donor_of_B007",
                "igvf:donor_B007"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO5261UCLF/",
            "accession": "IGVFDO5261UCLF",
            "aliases": [
                "igvf:donor_of_RUES2",
                "igvf:donor_RUES2"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO5656YCPC/",
            "accession": "IGVFDO5656YCPC",
            "aliases": [
                "ansuman-satpathy:donor_of_Mel-1",
                "igvf:donor_Mel-1"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO6169GISQ/",
            "accession": "IGVFDO6169GISQ",
            "aliases": [
                "ansuman-satpathy:donor_of_B009",
                "igvf:donor_B009"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2965ZTUG/",
            "accession": "IGVFDO2965ZTUG",
            "aliases": [
                "ansuman-satpathy:donor_of_GM01680",
                "igvf:donor_GM01680"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8977PNMK/",
            "accession": "IGVFDO8977PNMK",
            "aliases": [
                "ansuman-satpathy:donor_of_C001",
                "igvf:donor_C001"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO9904ZSML/",
            "accession": "IGVFDO9904ZSML",
            "aliases": [
                "ansuman-satpathy:donor_of_RUES1",
                "igvf:donor_RUES1"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO2379DTAU/",
            "accession": "IGVFDO2379DTAU",
            "aliases": [
                "ansuman-satpathy:donor_of_A007",
                "igvf:donor_A007"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO1038DAII/",
            "accession": "IGVFDO1038DAII",
            "aliases": [
                "ansuman-satpathy:donor_of_Hues6",
                "igvf:donor_Hues6"
            ],
            "sex": "female",
            "status": "released",
            "taxa": "Homo sapiens"
        }
    ],
    "file_set_type": "lipid-conjugated oligo sequencing",
    "files": [
        {
            "@id": "/sequence-files/IGVFFI4567TQQX/",
            "accession": "IGVFFI4567TQQX",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS3_i1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:32.020505+00:00",
            "file_format": "fastq",
            "file_size": 56621380,
            "href": "/sequence-files/IGVFFI4567TQQX/@@download/IGVFFI4567TQQX.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/77b49f30-ae1a-423a-b57b-c95f1eb0b747/IGVFFI4567TQQX.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L005_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2116WJTD/",
            "accession": "IGVFFI2116WJTD",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS1_r2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:01:49.350814+00:00",
            "file_format": "fastq",
            "file_size": 343074424,
            "href": "/sequence-files/IGVFFI2116WJTD/@@download/IGVFFI2116WJTD.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/ad9bdf42-aaff-4bb0-9b40-01dff1d7a1fa/IGVFFI2116WJTD.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L003_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4934WCGH/",
            "accession": "IGVFFI4934WCGH",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS4_r1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:03:25.681134+00:00",
            "file_format": "fastq",
            "file_size": 140951524,
            "href": "/sequence-files/IGVFFI4934WCGH/@@download/IGVFFI4934WCGH.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/5676cd91-c73c-475d-8580-63e77ce28066/IGVFFI4934WCGH.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L006_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI8892BTTS/",
            "accession": "IGVFFI8892BTTS",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS4_i1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:03:06.949736+00:00",
            "file_format": "fastq",
            "file_size": 56324681,
            "href": "/sequence-files/IGVFFI8892BTTS/@@download/IGVFFI8892BTTS.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/2e67a5fd-02f5-46ea-8daf-e7ce8d91f09c/IGVFFI8892BTTS.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L006_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3137UUIS/",
            "accession": "IGVFFI3137UUIS",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS1_r1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:01:40.104080+00:00",
            "file_format": "fastq",
            "file_size": 149000427,
            "href": "/sequence-files/IGVFFI3137UUIS/@@download/IGVFFI3137UUIS.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/213a596e-0cb6-4264-98ca-df5fbbc73200/IGVFFI3137UUIS.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L003_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4575PECK/",
            "accession": "IGVFFI4575PECK",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS3_i2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:39.128538+00:00",
            "file_format": "fastq",
            "file_size": 52489500,
            "href": "/sequence-files/IGVFFI4575PECK/@@download/IGVFFI4575PECK.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/e2bc8da4-3c17-4a36-8e2b-f61b659b601e/IGVFFI4575PECK.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L005_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1877XMIT/",
            "accession": "IGVFFI1877XMIT",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS2_i1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:01:59.078486+00:00",
            "file_format": "fastq",
            "file_size": 58449692,
            "href": "/sequence-files/IGVFFI1877XMIT/@@download/IGVFFI1877XMIT.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/1bf7f5ce-3954-4aa7-a89d-ca2106dc03ea/IGVFFI1877XMIT.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L004_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4768CILW/",
            "accession": "IGVFFI4768CILW",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS1_i1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:01:25.859194+00:00",
            "file_format": "fastq",
            "file_size": 59393051,
            "href": "/sequence-files/IGVFFI4768CILW/@@download/IGVFFI4768CILW.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/f37fbb32-83e9-45fa-9858-16dc67dc69a0/IGVFFI4768CILW.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L003_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0693AQUZ/",
            "accession": "IGVFFI0693AQUZ",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS3_r1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:47.150901+00:00",
            "file_format": "fastq",
            "file_size": 141335056,
            "href": "/sequence-files/IGVFFI0693AQUZ/@@download/IGVFFI0693AQUZ.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/8ba60cc8-9840-4c2c-b707-7bf56ee2bf56/IGVFFI0693AQUZ.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L005_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0955HZVP/",
            "accession": "IGVFFI0955HZVP",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS4_r2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:03:35.469891+00:00",
            "file_format": "fastq",
            "file_size": 324586075,
            "href": "/sequence-files/IGVFFI0955HZVP/@@download/IGVFFI0955HZVP.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/cc3743dc-c5b2-4afc-8a5f-7d8cc7382c72/IGVFFI0955HZVP.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L006_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3425WZBK/",
            "accession": "IGVFFI3425WZBK",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS1_i2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:01:32.966196+00:00",
            "file_format": "fastq",
            "file_size": 54796838,
            "href": "/sequence-files/IGVFFI3425WZBK/@@download/IGVFFI3425WZBK.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/1fcaa4d5-9869-4c80-b3d7-c163ce7fa801/IGVFFI3425WZBK.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L003_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7383EELH/",
            "accession": "IGVFFI7383EELH",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS3_r2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:56.708126+00:00",
            "file_format": "fastq",
            "file_size": 326206787,
            "href": "/sequence-files/IGVFFI7383EELH/@@download/IGVFFI7383EELH.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/6d07d775-1137-4df5-8fea-9ffa5bc0599b/IGVFFI7383EELH.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L005_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1390KROG/",
            "accession": "IGVFFI1390KROG",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS2_i2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:06.410355+00:00",
            "file_format": "fastq",
            "file_size": 53947746,
            "href": "/sequence-files/IGVFFI1390KROG/@@download/IGVFFI1390KROG.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/00507ce2-ec1b-4430-91cc-3dc05e17ae83/IGVFFI1390KROG.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L004_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2923BFPO/",
            "accession": "IGVFFI2923BFPO",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS2_r1"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:13.416723+00:00",
            "file_format": "fastq",
            "file_size": 146707886,
            "href": "/sequence-files/IGVFFI2923BFPO/@@download/IGVFFI2923BFPO.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/89dbc26c-48d3-4b67-a374-f0f1205218b2/IGVFFI2923BFPO.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L004_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4398NYVW/",
            "accession": "IGVFFI4398NYVW",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS2_r2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:02:22.524265+00:00",
            "file_format": "fastq",
            "file_size": 337069918,
            "href": "/sequence-files/IGVFFI4398NYVW/@@download/IGVFFI4398NYVW.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/bd90852b-2317-4773-a60f-f28d70b333b1/IGVFFI4398NYVW.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L004_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI9222SCPK/",
            "accession": "IGVFFI9222SCPK",
            "aliases": [
                "ansuman-satpathy:igvf_exp16_multi_10x1_NGS4_i2"
            ],
            "content_type": "reads",
            "controlled_access": true,
            "creation_timestamp": "2025-02-03T23:03:18.701889+00:00",
            "file_format": "fastq",
            "file_size": 52447820,
            "href": "/sequence-files/IGVFFI9222SCPK/@@download/IGVFFI9222SCPK.fastq.gz",
            "s3_uri": "s3://igvf-restricted-files/2025/02/03/94f8714f-ff85-4799-b239-49bb6bc6e040/IGVFFI9222SCPK.fastq.gz",
            "sequencing_platform": "/platform-terms/EFO_0022840/",
            "status": "released",
            "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf16/MULTI/CMAS18_MULTI1_S12_L006_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI6717NMVN/",
            "accession": "IGVFFI6717NMVN",
            "aliases": [
                "ansuman-satpathy:seqspec_igvf_exp16_multi_10x1_NGS2"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2025-02-26T01:35:30.620823+00:00",
            "file_format": "yaml",
            "file_size": 1338,
            "href": "/configuration-files/IGVFFI6717NMVN/@@download/IGVFFI6717NMVN.yaml.gz",
            "s3_uri": "s3://igvf-files/2025/02/26/58717590-d11c-46da-af8f-f65e8511b465/IGVFFI6717NMVN.yaml.gz",
            "status": "released",
            "submitted_file_name": "/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp16_multi_10x1_NGS2_multi_seqspec.yaml.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI8191RSEV/",
            "accession": "IGVFFI8191RSEV",
            "aliases": [
                "ansuman-satpathy:seqspec_igvf_exp16_multi_10x1_NGS3"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2025-02-26T01:35:36.341980+00:00",
            "file_format": "yaml",
            "file_size": 1339,
            "href": "/configuration-files/IGVFFI8191RSEV/@@download/IGVFFI8191RSEV.yaml.gz",
            "s3_uri": "s3://igvf-files/2025/02/26/9b71ac18-a699-4182-891c-4f98408aff76/IGVFFI8191RSEV.yaml.gz",
            "status": "released",
            "submitted_file_name": "/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp16_multi_10x1_NGS3_multi_seqspec.yaml.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI1813SGHR/",
            "accession": "IGVFFI1813SGHR",
            "aliases": [
                "ansuman-satpathy:seqspec_igvf_exp16_multi_10x1_NGS4"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2025-02-26T01:35:42.835097+00:00",
            "file_format": "yaml",
            "file_size": 1335,
            "href": "/configuration-files/IGVFFI1813SGHR/@@download/IGVFFI1813SGHR.yaml.gz",
            "s3_uri": "s3://igvf-files/2025/02/26/16223350-b299-414a-92a7-e1204325dd96/IGVFFI1813SGHR.yaml.gz",
            "status": "released",
            "submitted_file_name": "/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp16_multi_10x1_NGS4_multi_seqspec.yaml.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI6475KXDJ/",
            "accession": "IGVFFI6475KXDJ",
            "aliases": [
                "ansuman-satpathy:seqspec_igvf_exp16_multi_10x1_NGS1"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2025-02-26T01:35:25.101321+00:00",
            "file_format": "yaml",
            "file_size": 1338,
            "href": "/configuration-files/IGVFFI6475KXDJ/@@download/IGVFFI6475KXDJ.yaml.gz",
            "s3_uri": "s3://igvf-files/2025/02/26/ed50b07a-3a11-42f6-8451-ca5306826a94/IGVFFI6475KXDJ.yaml.gz",
            "status": "released",
            "submitted_file_name": "/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp16_multi_10x1_NGS1_multi_seqspec.yaml.gz",
            "upload_status": "validated"
        }
    ],
    "input_for": [
        "/analysis-sets/IGVFDS7388FOPN/"
    ],
    "lab": {
        "@id": "/labs/ansuman-satpathy/",
        "title": "Ansuman Satpathy, Stanford"
    },
    "measurement_sets": [
        {
            "@id": "/measurement-sets/IGVFDS7129TVLQ/",
            "accession": "IGVFDS7129TVLQ",
            "aliases": [
                "ansuman-satpathy:snRNA-seq_igvf16_10x1"
            ],
            "preferred_assay_title": "10x multiome with MULTI-seq",
            "status": "released"
        },
        {
            "@id": "/measurement-sets/IGVFDS4158FYXM/",
            "accession": "IGVFDS4158FYXM",
            "aliases": [
                "ansuman-satpathy:snATAC-seq_igvf16_10x1"
            ],
            "preferred_assay_title": "10x multiome with MULTI-seq",
            "status": "released"
        }
    ],
    "release_timestamp": "2025-03-22T00:40:53.167986+00:00",
    "samples": [
        {
            "@id": "/multiplexed-samples/IGVFSM3549KFGD/",
            "@type": [
                "MultiplexedSample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM3549KFGD",
            "aliases": [
                "ansuman-satpathy:multiplexed_sample_igvf16_10x1"
            ],
            "cellular_sub_pool": "1",
            "classifications": [
                "differentiated cell specimen",
                "multiplexed sample"
            ],
            "disease_terms": [],
            "institutional_certificates": [
                {
                    "@id": "/institutional-certificates/1926d993-629d-42d9-a962-f391ea6ee18f/",
                    "certificate_identifier": "IP115-23",
                    "controlled_access": true,
                    "data_use_limitation": "GRU",
                    "status": "in progress"
                }
            ],
            "modifications": [],
            "sample_terms": [
                {
                    "@id": "/sample-terms/EFO_0004905/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "status": "released",
                    "summary": "induced pluripotent stem cell",
                    "term_name": "induced pluripotent stem cell"
                }
            ],
            "status": "released",
            "summary": "multiplexed sample: Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 11 days; Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 3 days; ... and 6 more samples",
            "taxa": "Homo sapiens",
            "treatments": []
        }
    ],
    "schema_version": "12",
    "status": "released",
    "submitted_by": {
        "@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
        "title": "Christopher Mcginnis"
    },
    "submitted_files_timestamp": "2025-02-03T23:01:25.859194+00:00",
    "summary": "lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)",
    "uuid": "5c7bc25d-77dc-453c-bcd0-c589e1926603"
}