{
"@context": "/terms/",
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"@type": [
"AuxiliarySet",
"FileSet",
"Item"
],
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"jesse-engreitz:auxiliary_CRUDO_TAPseq-Auxin0hrs-Rep1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released human donor [IGVFDO0384OZRW](/human-donors/IGVFDO0384OZRW/) has in progress subobject publication [155f24ce-5c2c-4400-8651-da9447eaca25](/publications/155f24ce-5c2c-4400-8651-da9447eaca25/).",
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"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0384OZRW/"
}
],
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{
"category": "missing sequencing kit",
"detail": "Auxiliary set [IGVFDS0282GEHF](/auxiliary-sets/IGVFDS0282GEHF/) has sequence file(s) [IGVFFI5080FNQC](/sequence-files/IGVFFI5080FNQC/), [IGVFFI0308CWCN](/sequence-files/IGVFFI0308CWCN/), [IGVFFI1051BZRQ](/sequence-files/IGVFFI1051BZRQ/), [IGVFFI2340RLRP](/sequence-files/IGVFFI2340RLRP/), [IGVFFI7481IACD](/sequence-files/IGVFFI7481IACD/), [IGVFFI7657ATAO](/sequence-files/IGVFFI7657ATAO/), [IGVFFI6529TUVF](/sequence-files/IGVFFI6529TUVF/), [IGVFFI9836SEKG](/sequence-files/IGVFFI9836SEKG/), [IGVFFI1579GEEH](/sequence-files/IGVFFI1579GEEH/), [IGVFFI6069TAYE](/sequence-files/IGVFFI6069TAYE/), [IGVFFI6689KNLG](/sequence-files/IGVFFI6689KNLG/), [IGVFFI1488GZKB](/sequence-files/IGVFFI1488GZKB/) which lack specification of a `sequencing_kit`. Sequence files should specify a sequencing kit.",
"level": 40,
"level_name": "WARNING",
"name": "audit_inconsistent_sequencing_kit",
"path": "/auxiliary-sets/IGVFDS0282GEHF/"
}
]
},
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},
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},
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{
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],
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}
],
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},
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},
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},
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},
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},
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},
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},
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},
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},
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},
{
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},
{
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},
{
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},
{
"@id": "/configuration-files/IGVFFI5492QJUN/",
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"upload_status": "validated"
}
],
"input_file_set_for": [
"/analysis-sets/IGVFDS5308EMCG/"
],
"lab": {
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"title": "Jesse Engreitz, Stanford"
},
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{
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"aliases": [
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],
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}
],
"release_timestamp": "2024-07-10T20:26:34.539121+00:00",
"samples": [
{
"@id": "/in-vitro-systems/IGVFSM5799ZEJH/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
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"aliases": [
"jesse-engreitz:in-vitro-system_CRUDO_TAPseq-Auxin0hrs-Rep1"
],
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"cell line"
],
"construct_library_sets": [
"/construct-library-sets/IGVFDS9869EMNE/"
],
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],
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{
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"OntologyTerm",
"Item"
],
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"igvf:HCT116"
],
"status": "released",
"summary": "HCT116",
"term_name": "HCT116"
}
],
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"taxa": "Homo sapiens"
}
],
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"submitted_by": {
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"title": "Chongyon Park"
},
"submitted_files_timestamp": "2024-06-03T19:14:28.215396+00:00",
"summary": "gRNA sequencing for TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci",
"uuid": "7becfb30-bb65-4ea3-b353-3643e25e262d"
}